Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913792.1_cds_XP_016463799.1_56890
CDS Infomation

[gene=LOC107786809] [db_xref=GeneID:107786809] [protein=protein AIR1-like] [protein_id=XP_016463799.1] [location=complement(join(128402..128830,128994..129101,129219..129335,129425..129583,131955..132113,132216..132329,132466..132519,132618..132938))] [gbkey=CDS]
Sequence

ATGGGTAAGCGGGAAAAGAAGGAAAAGAAATCAGCAAAATCAGAAGCTATAGAGTTAGAA
AAATCAGCAGAGGTAAAAATTAAGAAATCTAAAAGAGTGCGAATTAAGGAAATAAAACAA
GACTATGATGATGATGATGATGATGATGCTGAAGCTAATGAAGACCTGAGCTTGAAAATC
ATTGAGAAAGCTTTGCTTCGTGGGTGCTCAGTTAAAAATGGCGAAGCTGTAATTGTTACA
GATTTGAAGGGTGAAAGTAGAAAGAGCAAAAAAGAGAAAAAAAAGAAGAAGGAAAAAAGC
ATTGAGTCCCAAGATGACCCCGTGTCAAGTGGAATAGATAAGGGTTTTAAAACTTTCTGT
AATGAGATGTCTCCGGCGGATGGAGTGAAAGAAGAAAGCATGGATATTAATGCTATGAAC
GTCGTTGATGCTGCAGCTGAAAAGAATCCTGCTGAGATGCCTAATAATGTTGTCCTACGA
AGGCTTCTTCGGGGTCCGAGGTACTTTGACCCTCCAGACAGCAGTTGGGGGACCTGCTAT
AATTGCGGTGAAGAAGGTCATGCTGCAGTCAACTGTACTTCAGCGAAACGCAAAAAACCA
TGTTTTGTTTGTGGGAGTTTTGACCATAATTCAAAACAGTGTACAAAGGGCAAAGATTGT
TTCATCTGTAAGAAGGGCGGTCATCGTGCTAGGGATTGCCCTGAAAAAAACCGAATATTT
GAAAGTTCAAGACGCTGTTTAAAATGTGGAGATTCTGGCCACGATATGTTCTCATGCAGG
AACGACTATTCTGCTGATGATCTGAAGGAAATACAATGTTACATTTGTAAGAGATTTGGT
CATCTTTGCTGTGCAAGCTACCCTGATGGTGGTCCGAGGGAAATATCCTGTTACAGATGT
GGTCTACTAGGCCATACCGGTTTGGCATGCACAGGATCTCGTGGGGAGACTAGTGGTACA
TGGCAGCTTAGTTCTTGTTATTGGTGTGGTGAAGAAGGACATTTTGCACGAGAATGCACT
AATTCCAATATCGTCAACAAGTGGAATCGGGAGTTATCGACCCCCAAGATGAAAGTGTCT
AAGGAAAGAAAGGAACATCATGAGTTTAGGTCTGTTCCACATGATTTTGGTAAGGCAAGA
AAAAAGAAAGCAGAATATGGAGGAGGATATGCATCAGGTTACAATACAAAACAAAGGGCT
GGTTGGATCACTGATGATACGGAAGACTTCCCTCGATCCAATGGTTGGAGATCTCCTTCA
ACTCCTACAAATAAGAGAGCCAGGATATCCAACTTTGGGGCTGGTGGTCATGCTTCTGTT
TCTTATTCATCTAGAAAGTCCAACAGGCGTGATTTTGATAATTCAACTTTTTATGGGTCA
GGCAATTATCATCACCATAGGTTTTCGGCTTCTCGATTTGGCAACAGCAGTCATGATGGG
AGGAGAAATTATAATTGGTAG

Peptide Sequence

PEP ID

XP_016463799.1
PEP Infomation

PREDICTED: protein AIR1-like [Nicotiana tabacum]
Sequence

MGKREKKEKKSAKSEAIELEKSAEVKIKKSKRVRIKEIKQDYDDDDDDDAEANEDLSLKI
IEKALLRGCSVKNGEAVIVTDLKGESRKSKKEKKKKKEKSIESQDDPVSSGIDKGFKTFC
NEMSPADGVKEESMDINAMNVVDAAAEKNPAEMPNNVVLRRLLRGPRYFDPPDSSWGTCY
NCGEEGHAAVNCTSAKRKKPCFVCGSFDHNSKQCTKGKDCFICKKGGHRARDCPEKNRIF
ESSRRCLKCGDSGHDMFSCRNDYSADDLKEIQCYICKRFGHLCCASYPDGGPREISCYRC
GLLGHTGLACTGSRGETSGTWQLSSCYWCGEEGHFARECTNSNIVNKWNRELSTPKMKVS
KERKEHHEFRSVPHDFGKARKKKAEYGGGYASGYNTKQRAGWITDDTEDFPRSNGWRSPS
TPTNKRARISNFGAGGHASVSYSSRKSNRRDFDNSTFYGSGNYHHHRFSASRFGNSSHDG
RRNYNW

Transcript Sequence

Gene sequence data has not been registered.